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Intron Name: Anas_platyrhynchos_platyrhynchos_1_146031287_146034087_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
146031287 - 146034087

Intron Length:
2801

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTGAGTAGT

5'SS Class:
strong_major

3'SS Sequence:
AATATTTTATTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTAAT

U12 Branch Point Sequence:
TGTACTTTGAAT

Flanking Amino Acid:
GQQGGTRKLWEIPPYETKGV

Intron Amino Acid Position:
326

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.3
0.79
0.9
77.8
38.7

Major BPS
84.4
0.85
1.1
84
34.5

Major PPT
68.8
0.42
1
67.8
42.5

Minor 5ss
31.6
-2.1
2.7
34.1
41.4

Minor BPS
63
0.49
1.5
77.92
38.1

Associated Gene:

Gene:
TMEM131

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

145987060 - 146083202
96143