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Intron Name: Anas_platyrhynchos_platyrhynchos_1_146177112_146178259_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

146177112 - 146178259

Intron Length:

1148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTATT

5'SS Class:

weak_major

3'SS Sequence:

GTTGTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

AAATCATTAACA

Flanking Amino Acid:

RSDITGFYYPGTVTKNISPT

Intron Amino Acid Position:

1078

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

83.5

35.1

Major BPS

71.6

0.54

33.1

Major PPT

80.1

0.68

0.8

77.9

36.6

Minor 5ss

61.6

0.39

2.1

77.4

37.4

Minor BPS

68.7

0.58

1.6

73.9

36.6

Associated Gene:

Gene:

VWA3B

Ensembl Gene ID:

ENSAPLG00000015715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016387

146120392 - 146189047

68656

ENSAPLT00000047169

146120439 - 146203893

83455

ENSAPLT00000043896

146120392 - 146189047

68656

ENSAPLT00000041876

146120439 - 146203893

83455