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Intron Name: Anas_platyrhynchos_platyrhynchos_1_146222152_146231844_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

146222152 - 146231844

Intron Length:

9693

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCGT

5'SS Class:

major

3'SS Sequence:

TTTGCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

CTATATATAATT

Flanking Amino Acid:

DIERIENGFIRTHSLCEDTS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

66.2

44.9

Major BPS

0.72

78.4

31.2

Major PPT

89.3

0.88

0.7

84.5

30.4

Minor 5ss

32.5

-2

3.4

48.2

47.3

Minor BPS

51.2

0.12

1.8

70.52

40.6

Associated Gene:

Gene:

CNGA3

Ensembl Gene ID:

ENSAPLG00000014458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048445

146220825 - 146246594

25770

ENSAPLT00000015072

146216805 - 146246594

29790