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Intron Name: Anas_platyrhynchos_platyrhynchos_1_146234215_146241533_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

146234215 - 146241533

Intron Length:

7319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTACTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATAAA

U12 Branch Point Sequence:

CGTGTTTTACTT

Flanking Amino Acid:

GIRERPGGVNRKKKEIFVID

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

66.3

0.4

1.1

34.4

Major PPT

89.3

0.88

0.7

81.3

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

48.6

-0

1.7

62.87

42.6

Associated Gene:

Gene:

CNGA3

Ensembl Gene ID:

ENSAPLG00000014458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048445

146220825 - 146246594

25770

ENSAPLT00000015072

146216805 - 146246594

29790