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Intron Name: Anas_platyrhynchos_platyrhynchos_1_146241642_146242193_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

146241642 - 146242193

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTTTCTT

Flanking Amino Acid:

VFYNWCMLVCRACFDELQID

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

84.2

33.4

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

88.7

0.87

0.6

88.9

20.4

Minor 5ss

44.3

-0.6

3.2

65.5

45.8

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

CNGA3

Ensembl Gene ID:

ENSAPLG00000014458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048445

146220825 - 146246594

25770

ENSAPLT00000015072

146216805 - 146246594

29790