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Intron Name: Anas_platyrhynchos_platyrhynchos_1_146242301_146245188_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

146242301 - 146245188

Intron Length:

2888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTATTCTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTCTTTAAAG

Flanking Amino Acid:

VFDMFVRFRTGFLEQGLLVQ

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.7

0.62

78.9

33.3

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

73.3

0.59

1.4

73.99

Associated Gene:

Gene:

CNGA3

Ensembl Gene ID:

ENSAPLG00000014458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015072

146216805 - 146246594

29790

ENSAPLT00000048445

146220825 - 146246594

25770