Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_146404186_146408881_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

146404186 - 146408881

Intron Length:

4696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

GGTTCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TCTCCTATCATA

Flanking Amino Acid:

MVLYFFYKNAMFVALLFWYQ

Intron Amino Acid Position:

1095

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

79.3

34.5

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

81.1

0.7

0.9

77.4

36.9

Minor 5ss

40.8

-1

3.4

63.8

41.6

Minor BPS

46.9

-0.2

61.11

39.6

Associated Gene:

Gene:

ATP10A

Ensembl Gene ID:

ENSAPLG00000014775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015455

146399636 - 146510061

110426