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Intron Name: Anas_platyrhynchos_platyrhynchos_1_146571286_146594486_F

Intron Information:

Intron Rank:

129402

Intron Class:

major

Intron Phase:

Intron Coordinates:

146571286 - 146594486

Intron Length:

23201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTGTGCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

CTGGCCTAAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

84.2

27.6

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

80.7

0.69

0.9

76.9

37.3

Minor 5ss

44.8

-0.6

2.8

61.7

43.1

Minor BPS

49.3

-0

1.9

59.87

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024100

146571074 - 146641945

70872