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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14669886_14675800_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
14669886 - 14675800

Intron Length:
5915

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTTTGTGAG

5'SS Class:
major

3'SS Sequence:
TATTTATTTCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TATTTAT

U12 Branch Point Sequence:
GTTTATTTATTT

Flanking Amino Acid:
LFSYLAKDGWRYMLGLSAVP

Intron Amino Acid Position:
240

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.4
0.57
1.2
66.1
39.4

Major BPS
88.7
0.96
0.8
78
36.5

Major PPT
86.2
0.81
0.8
78
40.1

Minor 5ss
34.5
-1.8
2.9
40.4
45.9

Minor BPS
58.5
0.34
1.8
77.47
39.3

Associated Gene:

Gene:
SLC2A13

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14639474 - 14713344
73871

14639835 - 14687013
47179