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Intron Name: Anas_platyrhynchos_platyrhynchos_1_146705139_146705387_R

Intron Information:

Intron Rank:

130630

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

146705139 - 146705387

Intron Length:

249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAATTGAT

5'SS Class:

major

3'SS Sequence:

CTCCAAAAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

ATCTCTTCCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.2

67.6

37.5

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

47.3

-0.1

1.1

42.9

34.1

Minor 5ss

37.3

-1.4

3.4

59.1

45.4

Minor BPS

52.9

0.17

74.15

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020339

146705090 - 146708996

3907