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Intron Name: Anas_platyrhynchos_platyrhynchos_1_146856016_146856147_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
146856016 - 146856147

Intron Length:
132

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGTGGC

5'SS Class:
strong_major

3'SS Sequence:
GCTCTGCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAC

U12 Branch Point Sequence:
GTGTGCTGACCC

Flanking Amino Acid:
YDIRLRPDFGGPPVCVGMNI

Intron Amino Acid Position:
58

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
90
0.94
0.8
75.7
34.4

Major BPS
66.3
0.4
1.1
57
41.8

Major PPT
68.7
0.42
0.9
61.5
35

Minor 5ss
27.6
-2.6
3
34.8
41.6

Minor BPS
46.6
-0.2
2.1
59.8
45.1

Associated Gene:

Gene:
GABRB3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

146745846 - 146856431
110586