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Intron Name: Anas_platyrhynchos_platyrhynchos_1_146890881_146899097_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

146890881 - 146899097

Intron Length:

8217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTGCATGAAATAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTGCATGAAAT

Flanking Amino Acid:

CVSMSLTSHFGFSQTPTAPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

73.2

39.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

55.8

0.13

1.1

51.5

41.7

Minor 5ss

40.1

-1.1

2.8

44.4

43.5

Minor BPS

54.9

0.23

1.9

79.81

41.4

Associated Gene:

Gene:

GABRA5

Ensembl Gene ID:

ENSAPLG00000015626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016340

146889461 - 146944202

54742