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Intron Name: Anas_platyrhynchos_platyrhynchos_1_146940285_146941699_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

146940285 - 146941699

Intron Length:

1415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TCCTCCTTTACA

Flanking Amino Acid:

RESVPARTVFGVTTVLTMTT

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.7

31.8

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

0.79

0.7

79.2

26.4

Minor 5ss

31.7

-2.1

2.6

35.1

34.5

Minor BPS

70.5

0.64

1.6

75.21

42.3

Associated Gene:

Gene:

GABRA5

Ensembl Gene ID:

ENSAPLG00000015626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016340

146889461 - 146944202

54742