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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147263769_147271904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147263769 - 147271904

Intron Length:

8136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

ATACAATTAAAA

Flanking Amino Acid:

KDATPARTALGITTVLTMTT

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

73.8

0.59

0.9

26.8

Major PPT

0.76

0.8

78.1

29.9

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

47.9

-0.1

1.8

60.69

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002609

146951348 - 147279127

327780