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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147550506_147551398_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147550506 - 147551398

Intron Length:

893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TATTTTTTGATT

Flanking Amino Acid:

ALAALAAVGERPSMVKVVEW

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.13

0.6

93.1

14.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

86.9

0.83

0.8

81.8

34.6

Minor 5ss

41.9

-0.9

2.9

57.8

46.8

Minor BPS

0.77

1.1

82.75

32.3

Associated Gene:

Gene:

OCA2

Ensembl Gene ID:

ENSAPLG00000002607

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002647

147437676 - 147608981

171306