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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147568353_147570480_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147568353 - 147570480

Intron Length:

2128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATGGCC

5'SS Class:

major

3'SS Sequence:

GACCCTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TTTTTACTAATA

Flanking Amino Acid:

AVPRRRHQQQVVYNWSLPLS

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

63.1

37.4

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

75.4

0.57

0.9

68.6

36.9

Minor 5ss

25.1

-2.9

3.3

33.3

42.1

Minor BPS

58.6

0.27

1.9

76.95

33.6

Associated Gene:

Gene:

OCA2

Ensembl Gene ID:

ENSAPLG00000002607

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002647

147437676 - 147608981

171306