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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147580773_147584406_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147580773 - 147584406

Intron Length:

3634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGAATT

5'SS Class:

major

3'SS Sequence:

TCTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CATTCAGTAAAT

Flanking Amino Acid:

LHAKFNLSKMRCCLKFLKVS

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.3

77.2

37.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

93.4

0.98

0.6

92.1

18.5

Minor 5ss

40.9

-1

2.9

58.1

46.1

Minor BPS

48.1

-0

2.3

71.75

44.5

Associated Gene:

Gene:

OCA2

Ensembl Gene ID:

ENSAPLG00000002607

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002647

147437676 - 147608981

171306