Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_147664254_147664867_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147664254 - 147664867

Intron Length:

614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATTT

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTATCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TAATTCTAAATT

Flanking Amino Acid:

PANAGKLPTQVPMEYNHLQE

Intron Amino Acid Position:

4325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

83.5

28.8

Major BPS

0.75

78.6

Major PPT

74.6

0.55

0.9

69.2

35.5

Minor 5ss

43.9

-0.7

3.1

65.3

45.8

Minor BPS

0.52

1.6

77.44

39.2

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574