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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147665056_147665873_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147665056 - 147665873

Intron Length:

818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATATCAG

5'SS Class:

major

3'SS Sequence:

TTTATTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ATTACTTTTATT

Flanking Amino Acid:

SLHCVCCTEDGEVYTWGDND

Intron Amino Acid Position:

4262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.1

56.6

42.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

82.5

0.73

0.8

81.3

36.3

Minor 5ss

39.1

-1.2

2.9

45.8

44.7

Minor BPS

61.9

0.46

1.6

78.73

37.4

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574