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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147668307_147669413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147668307 - 147669413

Intron Length:

1107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

GATTGCTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TTGTTGTAAACA

Flanking Amino Acid:

DSEDQLKPKLVEALQGYRVI

Intron Amino Acid Position:

4131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.9

31.6

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

76.9

0.61

68.9

41.7

Minor 5ss

33.9

-1.8

2.9

40.8

39.5

Minor BPS

50.3

0.01

2.3

70.13

42.8

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574