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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147670511_147672975_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147670511 - 147672975

Intron Length:

2465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CTTCATTTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TATTCTTCATTT

Flanking Amino Acid:

TLFAVTADGKLYATGYGAGG

Intron Amino Acid Position:

4000

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.3

26.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

73.9

0.54

74.1

34.1

Minor 5ss

-1.4

3.3

49.4

41.3

Minor BPS

57.7

0.32

1.8

77.25

39.7

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574