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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147677626_147678887_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147677626 - 147678887

Intron Length:

1262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAGAAT

5'SS Class:

major

3'SS Sequence:

TGTTGCTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

AGTGTGTAAATT

Flanking Amino Acid:

TSSSGTVKIPGAEGLRVEFD

Intron Amino Acid Position:

3628

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

73.7

36.4

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

0.49

41.4

Minor 5ss

39.4

-1.2

3.3

56.4

Minor BPS

43.7

-0.4

2.3

61.81

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574