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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147679042_147680584_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147679042 - 147680584

Intron Length:

1543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGGTTT

5'SS Class:

major

3'SS Sequence:

TCTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

GTAAACTTGATT

Flanking Amino Acid:

LSGMGTAYPQVADMLLELCV

Intron Amino Acid Position:

3577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.3

79.5

36.8

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

0.94

0.5

92.2

18.2

Minor 5ss

38.1

-1.3

3.4

48.2

Minor BPS

0.27

1.6

70.68

39.9

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574