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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147680777_147681128_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147680777 - 147681128

Intron Length:

352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAATGTTG

5'SS Class:

major

3'SS Sequence:

TCTTGTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAA

U12 Branch Point Sequence:

CTTTCTGCAATC

Flanking Amino Acid:

IAETMTKTKEDVESQSKVSG

Intron Amino Acid Position:

3513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

40.3

Major BPS

63.3

0.33

1.2

39.8

Major PPT

84.7

0.78

0.7

80.6

31.5

Minor 5ss

42.1

-0.9

3.3

55.8

42.9

Minor BPS

48.8

-0.1

2.2

65.76

40.9

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574