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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147682224_147682797_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147682224 - 147682797

Intron Length:

574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCATG

5'SS Class:

strong_major

3'SS Sequence:

TAAATGATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TCTGTCTTAAAT

Flanking Amino Acid:

ILMALQIMYARDAVVGALMP

Intron Amino Acid Position:

3413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.7

44.5

Major BPS

84.8

0.86

85.7

34.9

Major PPT

68.2

0.41

1.1

63.2

46.5

Minor 5ss

41.6

-0.9

3.2

56.4

Minor BPS

0.64

1.5

80.39

41.7

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574