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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147693724_147693888_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147693724 - 147693888

Intron Length:

165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTCTTTCAAT

Flanking Amino Acid:

SYMPSLVVVSGGNSLNNLIE

Intron Amino Acid Position:

2856

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

79.4

28.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.7

0.85

0.7

81.2

36.5

Minor 5ss

38.1

-1.3

3.1

48.5

47.7

Minor BPS

68.2

0.65

1.8

88.96

35.8

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574