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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147694931_147696517_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147694931 - 147696517

Intron Length:

1587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTAACCACTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTCATTTAACC

Flanking Amino Acid:

RHTFGRINEPGQSPVFCGRS

Intron Amino Acid Position:

2757

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.7

1.12

0.6

91.3

19.2

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

70.3

0.46

67.1

39.1

Minor 5ss

44.8

-0.6

2.8

61.1

43.8

Minor BPS

72.1

0.67

1.4

81.02

32.7

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574