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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147697952_147698068_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147697952 - 147698068

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTGACTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

AAGTACTTACCA

Flanking Amino Acid:

WVRYIHVELLGFPPQSSASH

Intron Amino Acid Position:

2632

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.04

0.8

78.8

38.3

Major BPS

76.3

0.65

67.3

39.3

Major PPT

62.6

0.28

1.1

55.6

44.8

Minor 5ss

39.6

-1.2

2.8

49.7

46.6

Minor BPS

54.4

0.13

1.8

64.11

41.8

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574