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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147703286_147703968_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147703286 - 147703968

Intron Length:

683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

TACCTCTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTACCT

Flanking Amino Acid:

RVCPLNQLKPLPVVAFNVNN

Intron Amino Acid Position:

2266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

63.8

43.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

79.2

0.66

0.8

73.3

31.2

Minor 5ss

41.8

-0.9

2.8

54.9

43.3

Minor BPS

74.2

0.84

1.5

90.89

33.1

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574