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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147709921_147710386_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147709921 - 147710386

Intron Length:

466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

CTTTGTCTAACA

Flanking Amino Acid:

KRPIPIKSPKDKWQPILSTV

Intron Amino Acid Position:

1606

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

77.7

33.3

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

84.6

0.78

0.8

78.8

33.2

Minor 5ss

38.2

-1.3

3.4

55.2

Minor BPS

53.6

0.11

2.1

71.45

41.1

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574