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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147711855_147712441_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147711855 - 147712441

Intron Length:

587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

CAAAGCTAAATA

Flanking Amino Acid:

DNNIQDHTVKDFLCQIERYC

Intron Amino Acid Position:

1408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

75.3

40.8

Major BPS

78.6

0.71

78.6

Major PPT

81.7

0.71

0.8

77.2

37.1

Minor 5ss

40.5

-1.1

3.1

57.5

46.7

Minor BPS

-0.4

49.71

41.5

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574