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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147712657_147713261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147712657 - 147713261

Intron Length:

605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGCAAA

5'SS Class:

major

3'SS Sequence:

TTCTTTATTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTTCTTTATTT

Flanking Amino Acid:

PLSPLEVECAKWLKSSIFSG

Intron Amino Acid Position:

1336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

68.2

38.6

Major BPS

87.6

0.93

0.9

89.3

Major PPT

0.81

0.7

85.7

27.3

Minor 5ss

40.9

-1

2.9

54.2

43.9

Minor BPS

76.2

0.9

1.4

91.47

32.2

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574