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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147713413_147713522_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147713413 - 147713522

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAATG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

TAGCTTTCAACT

Flanking Amino Acid:

HAFCVGQYMEPDQEVITTPD

Intron Amino Acid Position:

1286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.9

36.7

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

89.6

0.89

0.6

83.8

31.2

Minor 5ss

36.4

-1.5

3.1

48.5

47.2

Minor BPS

56.1

0.27

1.5

70.45

40.5

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574