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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147715182_147715469_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147715182 - 147715469

Intron Length:

288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAATAT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

VSHVVDGDLTGILLPELVVS

Intron Amino Acid Position:

1132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

83.9

30.3

Major BPS

52.3

0.06

1.3

49.4

44.5

Major PPT

82.6

0.73

0.9

81.2

36.5

Minor 5ss

39.3

-1.2

3.3

57.3

47.4

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574