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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147716159_147716940_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

147716159 - 147716940

Intron Length:

782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTACA

5'SS Class:

strong_major

3'SS Sequence:

GTATACCAATTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ACTCTTTTAAAT

Flanking Amino Acid:

PLVQLIQQLLRNIASQTIAK

Intron Amino Acid Position:

1018

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.6

29.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

55.6

0.13

53.6

41.3

Minor 5ss

36.1

-1.6

2.6

Minor BPS

61.2

0.43

1.4

72.46

38.4

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574