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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147721404_147722733_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147721404 - 147722733

Intron Length:

1330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTAGTAGC

5'SS Class:

major

3'SS Sequence:

TCTTCTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCATAT

U12 Branch Point Sequence:

CTTCTTTTAAAG

Flanking Amino Acid:

DAQTLAVTENGQVWSWGDGD

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.2

40.4

Major BPS

47.6

-0.1

1.2

42.9

40.1

Major PPT

80.3

0.68

81.7

27.6

Minor 5ss

32.6

-2

2.5

35.7

34.2

Minor BPS

58.1

0.12

1.5

61.29

40.8

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574