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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147722848_147723289_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147722848 - 147723289

Intron Length:

442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTATATTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TCTACTTTATAT

Flanking Amino Acid:

GRGNYGRLGHGSSEDQTIPM

Intron Amino Acid Position:

587

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

78.4

31.3

Major BPS

79.2

0.73

75.3

39.4

Major PPT

71.9

0.49

1.1

72.4

36.4

Minor 5ss

48.1

-0.2

2.5

63.2

43.8

Minor BPS

55.9

0.26

1.8

73.68

43.2

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574