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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147726199_147726923_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147726199 - 147726923

Intron Length:

725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTATT

5'SS Class:

major

3'SS Sequence:

TCTTATTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TATTTCAAAACT

Flanking Amino Acid:

PQCSSPTSHKGSLQEVIAWG

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

1.2

81.8

38.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

84.1

0.77

0.8

77.1

36.8

Minor 5ss

45.8

-0.4

68.3

42.6

Minor BPS

59.1

0.36

1.9

81.79

39.5

Associated Gene:

Gene:

HERC2

Ensembl Gene ID:

ENSAPLG00000003410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003662

147651096 - 147757669

106574