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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147789784_147791676_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147789784 - 147791676

Intron Length:

1893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGCCG

5'SS Class:

major

3'SS Sequence:

CTTCCTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTCTAATA

Flanking Amino Acid:

KKGIVRARGRGTSYLTDIVW

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

57.9

46.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

80.6

0.69

0.7

72.7

32.1

Minor 5ss

29.7

-2.3

3.4

38.8

46.5

Minor BPS

66.6

0.52

1.6

79.19

30.8

Associated Gene:

Gene:

NIPA1

Ensembl Gene ID:

ENSAPLG00000005169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005342

147789327 - 147798732

9406