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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147795662_147797000_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147795662 - 147797000

Intron Length:

1339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACGCTTTTAATA

Flanking Amino Acid:

TPLGALGVPFGSILASYLLK

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

78.9

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.38

1.2

70.2

39.4

Minor 5ss

35.9

-1.6

3.6

48.1

47.5

Minor BPS

57.2

0.22

1.2

57.95

36.3

Associated Gene:

Gene:

NIPA1

Ensembl Gene ID:

ENSAPLG00000005169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005342

147789327 - 147798732

9406