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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147813140_147814379_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147813140 - 147814379

Intron Length:

1240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATACG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCAATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTCTTTCAATT

Flanking Amino Acid:

RLARKGSMRAGQGGHAYLKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

36.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.8

0.71

0.8

78.5

33.5

Minor 5ss

35.4

-1.7

2.7

43.2

43.8

Minor BPS

59.4

0.37

1.5

75.55

35.2

Associated Gene:

Gene:

NIPA2

Ensembl Gene ID:

ENSAPLG00000026293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036753

147813001 - 147817333

4333