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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147853532_147854079_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147853532 - 147854079

Intron Length:

548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

CAAAGCTTAAGA

Flanking Amino Acid:

ETLLKQRHVQLLGRSIDLNR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

73.8

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

92.8

0.96

0.5

93.3

15.6

Minor 5ss

35.8

-1.6

2.8

40.4

Minor BPS

46.5

-0.2

2.1

53.96

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020705

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037104

147847524 - 147854572

7049