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Intron Name: Anas_platyrhynchos_platyrhynchos_1_147896032_147898799_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147896032 - 147898799

Intron Length:

2768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

AAGCCTTCAAAA

Flanking Amino Acid:

NLMQTLKKDYRLVEYLQAMR

Intron Amino Acid Position:

770

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

68.1

0.45

73.5

28.6

Major PPT

78.1

0.63

0.8

77.5

31.2

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

48.1

-0.1

1.6

54.39

37.5

Associated Gene:

Gene:

TUBGCP5

Ensembl Gene ID:

ENSAPLG00000005776

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005991

147890460 - 147912930

22471