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Intron Name: Anas_platyrhynchos_platyrhynchos_1_148049770_148053067_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148049770 - 148053067

Intron Length:

3298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTAATAAAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TGATGCATAACT

Flanking Amino Acid:

TVNDVFNGTKVFVSESKASA

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.7

43.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

61.1

0.25

1.1

56.9

42.1

Minor 5ss

43.2

-0.7

2.9

55.9

48.3

Minor BPS

57.7

0.32

2.1

79.01

42.4

Associated Gene:

Gene:

RP2

Ensembl Gene ID:

ENSAPLG00000005687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005883

148045375 - 148053151

7777