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Intron Name: Anas_platyrhynchos_platyrhynchos_1_148122633_148123966_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148122633 - 148123966

Intron Length:

1334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGAATC

5'SS Class:

major

3'SS Sequence:

TTCTATGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

TTTTCTTCTATG

Flanking Amino Acid:

FDYDIQTGKIDNRRSVYKLE

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

73.4

35.5

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

81.9

0.72

0.9

76.5

37.3

Minor 5ss

44.3

-0.6

2.8

57.9

40.9

Minor BPS

54.3

-0

1.9

67.32

40.7

Associated Gene:

Gene:

RGN

Ensembl Gene ID:

ENSAPLG00000005624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005831

148120469 - 148130420

9952