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Intron Name: Anas_platyrhynchos_platyrhynchos_1_148124099_148129419_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148124099 - 148129419

Intron Length:

5321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAAACAA

U12 Branch Point Sequence:

CAAACAAGAAGC

Flanking Amino Acid:

GRVIRLDPETGKRIQTVKLP

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

75.3

40.8

Major BPS

46.7

-0.2

32.2

Major PPT

88.6

0.87

0.7

81.3

36.4

Minor 5ss

40.5

-1.1

3.1

57.5

46.7

Minor BPS

36.4

-1

1.9

40.8

37.7

Associated Gene:

Gene:

RGN

Ensembl Gene ID:

ENSAPLG00000005624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005831

148120469 - 148130420

9952