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Intron Name: Anas_platyrhynchos_platyrhynchos_1_148158733_148159357_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

148158733 - 148159357

Intron Length:

625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCACTC

5'SS Class:

major

3'SS Sequence:

TTCGTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TTATAGCTAAGG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.5

0.41

1.2

44.1

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

82.7

0.74

0.8

77.3

31.5

Minor 5ss

-1

3.4

59.9

44.6

Minor BPS

40.6

-0.8

2.6

53.96

46.3

Associated Gene:

Gene:

PLCXD1

Ensembl Gene ID:

ENSAPLG00000005609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005800

148158576 - 148174171

15596