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Intron Name: Anas_platyrhynchos_platyrhynchos_1_148165603_148168257_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148165603 - 148168257

Intron Length:

2655

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCACCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

TTCTGTTTCACC

Flanking Amino Acid:

PIIMKWSITQVLTVTEQLEA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

81.8

0.72

0.8

78.3

30.2

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

52.1

0.05

2.2

69.26

Associated Gene:

Gene:

PLCXD1

Ensembl Gene ID:

ENSAPLG00000005609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005800

148158576 - 148174171

15596