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Intron Name: Anas_platyrhynchos_platyrhynchos_1_148172409_148173123_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148172409 - 148173123

Intron Length:

715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTACG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GAATATTTAATG

Flanking Amino Acid:

LERMKRMGRPEKFFVAGINL

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.5

40.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

87.1

0.83

0.8

85.1

34.9

Minor 5ss

-1.7

2.8

43.3

43.8

Minor BPS

55.1

0.02

1.5

55.35

39.8

Associated Gene:

Gene:

PLCXD1

Ensembl Gene ID:

ENSAPLG00000005609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005800

148158576 - 148174171

15596