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Intron Name: Anas_platyrhynchos_platyrhynchos_1_148179370_148180681_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
148179370 - 148180681

Intron Length:
1312

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTG|GTAAGCAAA

5'SS Class:
strong_major

3'SS Sequence:
TTATTTTAATTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTATTTTAATT

Flanking Amino Acid:
VISVMGYTNCGKTTLIKALT

Intron Amino Acid Position:
447

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.2
0.78
0.9
75.9
35.2

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
73.7
0.53
1
75.6
38.3

Minor 5ss
38.8
-1.3
2.9
45.4
43.9

Minor BPS
76.1
0.9
1.1
87.86
31.1

Associated Gene:

Gene:
GTPBP6

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

148175493 - 148186370
10878